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Top lme4 books mentioned on stackoverflow.com

Software for Data Analysis

John Chambers

John Chambers turns his attention to R, the enormously successful open-source system based on the S language. His book guides the reader through programming with R, beginning with simple interactive use and progressing by gradual stages, starting with simple functions. More advanced programming techniques can be added as needed, allowing users to grow into software contributors, benefiting their careers and the community. R packages provide a powerful mechanism for contributions to be organized and communicated. This is the only advanced programming book on R, written by the author of the S language from which R evolved.

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Statistical Models in S

John M. Chambers, Trevor Hastie

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Mixed Effects Models and Extensions in Ecology with R

Alain Zuur, Elena N. Ieno, Neil Walker, Anatoly A. Saveliev, Graham M. Smith

This book discusses advanced statistical methods that can be used to analyse ecological data. Most environmental collected data are measured repeatedly over time, or space and this requires the use of GLMM or GAMM methods. The book starts by revising regression, additive modelling, GAM and GLM, and then discusses dealing with spatial or temporal dependencies and nested data.

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